Winding, A., Bang-Andreasen, T., Hansen, L. H., Panitz, F., Krogh, P. H., Krause-Jensen, D., Stæhr, P., Nicolaisen, M., Hendriksen, N. B., Sapkota, R., Santos, S. & Andersen, L. W. (2019).
eDNA in environmental monitoring. Aarhus University, DCE - Danish Centre for Environment and Energy. Teknisk rapport fra DCE - Nationalt Center for Miljø og Energi No. 133
https://dce2.au.dk/pub/TR133.pdf
Winding, A., Krogh, P. H., Lilja, M. A., Buivydaitė, Ž.
& Sapkota, R. (2021).
Effects of nitrification inhibitors on Danish soil organisms. Poster session presented at Seminar on Technologies for a Danish Zero Greenhouse Gas Emission Agriculture, Middelfart, Denmark.
Wiberg-Larsen, P., Hansen, S. B., Rinne, A., Viitanen, E.
& Krogh, P. H. (2021).
Key to Ptychopteridae (Diptera) larvae of Northern Europe, with notes on distribution and biology.
Zootaxa,
5039(2), 179–200.
https://doi.org/10.11646/zootaxa.5039.2.2
Van den Bulcke, L., De Backer, A., Wittoeck, J., Beentjes, K., Maes, S., Christodoulou, M., Martinez Arbizu, P.
, Sapkota, R., Van der Hoorn, B.
, Winding, A., Hostens, K. & Derycke, S. (2023).
DNA metabarcoding on repeat: Sequencing data of marine macrobenthos are reproducible and robust across labs and protocols.
Ecological Indicators,
150, Article 110207.
https://doi.org/10.1016/j.ecolind.2023.110207
Stæhr, P. A., Dahl, K., Buur, H., Göke, C., Sapkota, R., Winding, A., Panova, M., Obst, M. & Sundberg, P. (2022).
Environmental DNA monitoring of biodiversity hotspots in Danish marine waters.
Frontiers in Marine Science,
8, Article 800474.
https://doi.org/10.3389/fmars.2021.800474
Stæhr, P. A., Andersen, N. R., Andersen, K. R.
, Buur, H., Jakobsen, H., Maar, M., Larsen, J., Sapkota, R., Schourup-Kristensen, V., Zimmer, K. & Winding, A. (2023).
Identification, dispersal, and possible mitigation responses for non-indigenous species in Danish Wadden Sea area. Aarhus University, DCE - Danish Centre for Environment and Energy. Scientific Report from DCE - Danish Centre for Environment and Energy No. 547
http://dce2.au.dk/pub/SR547.pdf
Sapkota, R., Santos, S., Farias, P. D. G., Krogh, P. H. & Winding, A. (2020).
Insights into the earthworm gut multi-kingdom microbial communities.
Science of the Total Environment,
727, Article 138301.
https://doi.org/10.1016/j.scitotenv.2020.138301
Sapkota, R., Winding, A., Stæhr, P. A., Andersen, N. R., Buur, H. & Hablutzel, P. (2023).
Use of metabarcoding to detect non-indigenous species in Danish harbors: Methods comparison. Aarhus University, DCE - Danish Centre for Environment and Energy. Technical Report from DCE – Danish Centre for Environment and Energy No. 267
https://dce2.au.dk/pub/TR267.pdf
Santos, S., Schöler, A.
, Nielsen, T. K., Hansen, L. H., Schloter, M.
& Winding, A. (2020).
Land use as a driver for protist community structure in soils under agricultural use across Europe.
Science of the Total Environment,
717, Article 137228.
https://doi.org/10.1016/j.scitotenv.2020.137228
Lilja, M. A., Buivydaite, Z., Zervas, A., Krogh, P. H., Winding, B. W.
, Winding, A. & Sapkota, R. (2023).
Comparing Earthworm Biodiversity Estimated by DNA Metabarcoding and Morphology-based Approaches.
Applied Soil Ecology,
185, Article 104798.
https://doi.org/10.1016/j.apsoil.2022.104798
Gravesen, E. V., Dušátková, L., Athey, K., Qin, J.
& Krogh, P. H. (2024).
Arthropod food webs in the foreland of a retreating Greenland glacier: Integrating molecular gut content analysis with Structural Equation Modelling.
Ecology and Evolution,
14(12), 1-37. Article e70687.
https://doi.org/10.1002/ece3.70687
Buivydaite, Z., Lilja, M. A., Sapkota, R., Hansen, B. W.
, Ellegaard-Jensen, L., Hendriksen, N. B., Krogh, P. H. & Winding, A. (2023).
Earthworms shape prokaryotic communities and affect extracellular enzyme activities in agricultural soil.
European Journal of Soil Biology,
115, Article 103474.
https://doi.org/10.1016/j.ejsobi.2023.103474
Andersen, N. R., Stæhr, P. A., Andersen, K. R., Buur, H., Jakobsen, H., Winding, A. & Sapkota, R. (2023).
Havneovervågning af ikke-hjemmehørende arter 2021: Havstrategiens deskriptor 2. Aarhus University, DCE - Danish Centre for Environment and Energy. Videnskabelig rapport fra DCE No. 534
https://dce2.au.dk/pub/SR534.pdf