Vole_Base Class Reference

Base class for voles - all vole objects are descended from this class. More...

#include <vole_all.h>

Public Member Functions
	Vole_Base (struct_Vole_Adult *p_aVoleStruct)
	Constructor for Vole_Base. More...
virtual	~Vole_Base ()
virtual void	Init (struct_Vole_Adult *p_aVoleStruct)
virtual void	ReInit (struct_Vole_Adult *p_aVoleStruct)
virtual void	BeginStep ()
	BeingStep behaviour - must be implemented in descendent classes. More...
virtual void	Step ()
	Step behaviour - must be implemented in descendent classes. More...
virtual void	EndStep ()
	All voles age at the end of the day. More...
void	st_Dying ()
	All voles end here on death. More...
void	SetBreedingSeason (bool a_flag)
	Set Breeding Season flag. More...
void	SetWeight (double W)
void	Setm_Mature ()
void	Set_BirthYear (int BirthYear)
void	Set_MotherId (unsigned MotherIdNo)
void	Set_FatherId (unsigned FatherIdNo)
void	Set_NoYoungTot (int a_NoOfYoung)
void	Set_XBorn (int a_Location_x)
void	Set_YBorn (int a_Location_y)
void	Set_ElemBorn (int a_Location_x, int a_Location_y)
void	Set_VegBorn (int a_Location_x, int a_Location_y)
void	Set_PolyRefBorn (int a_Location_x, int a_Location_y)
void	Set_Age (int Age)
virtual int	WhatState ()
bool	SupplyBornLastYear ()
	Were we born this year? More...
bool	SupplyTerritorial ()
int	SupplyFatherId ()
int	SupplyMotherId ()
bool	SupplySex ()
int	SupplyBirthYear ()
int	SupplyTotNoYoung ()
int	SupplyXBorn ()
int	SupplyYBorn ()
int	SupplyPolyRefBorn ()
int	SupplyElemBorn ()
TTypesOfLandscapeElement	SupplyElemType ()
int	SupplyVegBorn ()
int	SupplyTerrRange ()
double	SupplyWeight ()
int	SupplyIDNo ()
bool	SupplyMature ()
int	SupplyDeathCause ()
unsigned	SupplyAge ()
unsigned	SupplyX ()
unsigned	SupplyY ()
bool	SupplyInTrap ()
InTrapPosition	SupplyTrapPosition ()
void	SetFree ()
int	SupplyHomoZyg ()
int	SupplyHeteroZyg ()
int	SupplyAllele (int locus, int allele)
uint32	SupplyMyAllele (int i, int j)
int	GetGeneticFlag ()
int	GetDirectFlag ()
void	SetGeneticFlag ()
void	SetDirectFlag ()
void	UnsetGeneticFlag ()
void	UnsetDirectFlag ()
GeneticMaterial	SupplyGenes ()
virtual void	OnKilled ()
virtual bool	MortalityTest ()
	Do a mortality test. More...
void	CopyMyself (VoleObject a_vole)
	Duplicates a vole. More...
void	SetFertile (bool f)
	Set the male vole fertility. More...
bool	GetFertile ()
	Get the male vole fertility. More...
Public Member Functions inherited from TAnimal
unsigned	SupplyFarmOwnerRef ()
AnimalPosition	SupplyPosition ()
APoint	SupplyPoint ()
int	SupplyPolygonRef ()
int	Supply_m_Location_x ()
int	Supply_m_Location_y ()
virtual void	KillThis ()
virtual void	CopyMyself ()
void	SetX (int a_x)
void	SetY (int a_y)
	TAnimal (int x, int y, Landscape *L)
virtual void	ReinitialiseObject (int x, int y, Landscape *L)
	Used to re-use an object - must be implemented in descendent classes. More...
virtual void	Dying ()
void	CheckManagement (void)
void	CheckManagementXY (int x, int y)
virtual bool	OnFarmEvent (FarmToDo)
Public Member Functions inherited from TALMaSSObject
int	GetCurrentStateNo ()
	Returns the current state number. More...
void	SetCurrentStateNo (int a_num)
	Sets the current state number. More...
bool	GetStepDone ()
	Returns the step done indicator flag. More...
void	SetStepDone (bool a_bool)
	Sets the step done indicator flag. More...
virtual void	ReinitialiseObject ()
	Used to re-use an object - must be implemented in descendent classes. More...
	TALMaSSObject ()
	The constructor for TALMaSSObject. More...
virtual	~TALMaSSObject ()
	The destructor for TALMaSSObject. More...
void	OnArrayBoundsError ()
	Used for debugging only, tests basic object properties. More...

Public Attributes
TTypeOfVoleState	CurrentVState
Vole_Population_Manager *	m_OurPopulation

Protected Member Functions
virtual void	RodenticideIngestion (void)
double	CalculateCarryingCapacity (int x, int y, int a_ddep)
int	MoveQuality (int p_x, int p_y)
	Test a location for quality while moving. More...
void	MoveTo (int p_Vector, int p_Distance, int iterations)
	Movement. More...
void	DoWalking (int p_Distance, int &p_Vector, int &vx, int &vy)
	Walking. More...
void	DoWalkingCorrect (int p_Distance, int &p_Vector, int &vx, int &vy)
	Walking where there is a danger of stepping off the world. More...
void	Escape (int p_Vector, int p_Distance)
	Dispersal - directed movement. More...
void	CheckTraps ()
virtual void	SetLocation ()
virtual void	FreeLocation ()
virtual bool	GetLocation (int, int)
Protected Member Functions inherited from TAnimal
void	CorrectWrapRound ()
	Corrects wrap around co-ordinate problems. More...

Protected Attributes
int	m_BirthYear
bool	m_BornLastYear
	A flag set if the female was born the year before. More...
unsigned int	m_MinTerrRange
unsigned	m_MotherId
unsigned	m_FatherId
int	m_Death
int	m_TerrRange
bool	m_Sex
bool	m_Mature
int	m_Age
int	m_XBorn
int	m_YBorn
int	m_PolyRefBorn
int	m_ElemBorn
int	m_VegBorn
int	m_LifeSpan
double	m_Weight
bool	m_fertile
	Flag indicating the fertility state (true means fertile) More...
int	m_NoOfYoungTotal
int	m_DispVector
bool	m_Have_Territory
int	m_Reserves
unsigned	IDNo
int	SimH
int	SimW
GeneticMaterial	m_MyGenes
InTrapPosition	m_intrappos
Protected Attributes inherited from TAnimal
int	m_Location_x
int	m_Location_y
Landscape *	m_OurLandscape
Protected Attributes inherited from TALMaSSObject
int	m_CurrentStateNo
	The basic state number for all objects - '-1' indicates death. More...
bool	m_StepDone
	Indicates whether the iterative step code is done for this timestep. More...

Static Protected Attributes
static unsigned int	m_MaxMaleTerritorySize = 0
static unsigned int	m_MaxFemaleTerritorySize = 0
static unsigned int	m_MinMaleTerritorySize = 0
static unsigned int	m_MinFemaleTerritorySize = 0
static double	m_MinFVoleHabQual = 0
static double	m_MinJMVoleHabQual = 0
static double	m_MinMVoleHabQual = 0
static double	m_MaleTerritoryRangeSlope = 0
static double	m_FemaleTerritoryRangeSlope = 0
static double	m_FHabQualThreshold3
static double	m_FHabQualThreshold2
static double	m_FHabQualThreshold1
static double	m_MHabQualThreshold3
static double	m_MHabQualThreshold2
static double	m_MHabQualThreshold1
static bool	m_BreedingSeason = false

Detailed Description

Base class for voles - all vole objects are descended from this class.

Definition at line 152 of file vole_all.h.

Constructor & Destructor Documentation

Vole_Base()

Vole_Base::Vole_Base

(

struct_Vole_Adult *

p_aVoleStruct

)

Constructor for Vole_Base.

Definition at line 228 of file Vole_all.cpp.

                                                          : TAnimal(p_aVoleStruct->x, p_aVoleStruct->y, p_aVoleStruct->L)
    {
        Init(p_aVoleStruct);
    }

References Init().

~Vole_Base()

Vole_Base::~Vole_Base ( )

virtual

Definition at line 304 of file Vole_all.cpp.

{
}

Member Function Documentation

BeginStep()

virtual void Vole_Base::BeginStep ( void  )

inlinevirtual

BeingStep behaviour - must be implemented in descendent classes.

Reimplemented from TAnimal.

Reimplemented in Vole_JuvenileFemale, and Vole_JuvenileMale.

Definition at line 290 of file vole_all.h.

{};

CalculateCarryingCapacity()

double Vole_Base::CalculateCarryingCapacity ( int  p_x, int  p_y, int  a_ddep  )

protected

Returns the sum of the qualities in the area covered by the territory (even if the vole does not have one)

Uses the algorithm for fast searching of square arrays with wrap around co-ordinates.
parameters = x,y starting coordinates top left
range = extent of the space to search
bottom left coordinate is therefore x+range, y+range
22/09/2000

For each polygon it gets the quality and multiplies by area of that polygon in the territory. This is summed for all polygons in the territoryto get overall quality. The value is then divided by the number of voles present less a threshold value.

Definition at line 384 of file Vole_all.cpp.

{
  int NoPolygons = 0;
  int PolyRefData[500][2];
  // First convert centre co-rdinates to square co-ordinates
  double quality = 0;
  int x=p_x - m_MinTerrRange;
  if (x<0) x+=SimW;
  int y=p_y - m_MinTerrRange;
  if (y<0) y+=SimH;
  int range_x=m_MinTerrRange+m_MinTerrRange;
  int range_y=m_MinTerrRange+m_MinTerrRange;
  // Stage 1 make a list of polygons
  // create the extent variables
  int xextent0 = x+range_x;
  int yextent0 = y+range_y;
  int xextent1 = (x+range_x)-SimW;
  int yextent1 = (y+range_y)-SimH;
  // Create the looping variables needed
  int Dfinx=xextent0;
  int Dfiny=yextent0;
  int Afinx=0;  // unless the finx values for A-C are changed
  int Bfinx=0;  // the value of zero will stop the A-C loops from executing
  int Cfinx=0;
  int Afiny=0; // this one assigned 0 to stop compiler complaints
  // Now create the loop values;
  if (x+range_x<=SimW)
  {
    // Type B & D (overlap bottom, no overlap)
    if (yextent0>SimH)
    {
      // Type B (overlap bottom only)
      Dfiny=SimH;
      Bfinx=x+range_x;
    }
  }
  else
  {
    // Type A & C overlap left edge or bottom & left
    if (yextent0>SimH)
    {
      // Type C overlap bottom and left
      Afinx=xextent1;
      Afiny=SimH;
      Bfinx=SimW;
      Cfinx=xextent1;
      Dfinx=SimW;
      Dfiny=SimH;
    }
    else
    {
      // Type A overlap left edge
      Afinx=xextent1;
      Afiny=yextent0;
      Dfinx=SimW;
    }
  }
  // the default is:
  // Type D no overlap
 
 
  // A Loop
  for (int i=0; i<Afinx; i++)
  {
    for (int j=y; j<Afiny; j++)
    {
      // Get the polyref
      int PRef = m_OurLandscape->SupplyPolyRefIndex(i,j);
      // check if we have had this one already
            bool found=false;
            for (int k=0; k<NoPolygons; k++)
            {
                if (PolyRefData[k][0]==PRef)
                {
                  PolyRefData[k][1]++;
                  found = true;
                  break;
                }
            }
            if (!found)
//*/
      {
        // don't have this one so get the height & type to the PolyDatas arrays
        PolyRefData[NoPolygons][0]=PRef;
        PolyRefData[NoPolygons][1]=1;
        NoPolygons++;
      }
    }
  }
  // B Loop
  for (int i=x; i<Bfinx; i++)
  {
    for (int j=0; j<yextent1; j++)
    {
      // Get the polyref
      int PRef = m_OurLandscape->SupplyPolyRefIndex(i,j);
      // check if we have had this one already
/*
    int index=-1;
      for (int k=0; k<NoPolygons; k++)
      {
        if (PolyRefData[k][0]==PRef)
        {
          index=k;
          break;
        }
      }
      if (index!=-1)
      {
        PolyRefData[index][1]++;
      }
      else
*/
            bool found=false;
            for (int k=0; k<NoPolygons; k++)
            {
                if (PolyRefData[k][0]==PRef)
                {
                  PolyRefData[k][1]++;
                  found = true;
                  break;
                }
            }
            if (!found)
//*/
      {
        // don't have this one so get the height & type to the PolyDatas arrays
        PolyRefData[NoPolygons][0]=PRef;
        PolyRefData[NoPolygons][1]=1;
        NoPolygons++;
      }
    }
  }
  // C Loop
  for (int i=0; i<Cfinx; i++)
  {
    for (int j=0; j<yextent1; j++)
    {
      // Get the polyref
      int PRef = m_OurLandscape->SupplyPolyRefIndex(i,j);
      // check if we have had this one already
/*
    int index=-1;
      for (int k=0; k<NoPolygons; k++)
      {
        if (PolyRefData[k][0]==PRef)
        {
          index=k;
          break;
        }
      }
      if (index!=-1)
      {
        PolyRefData[index][1]++;
      }
      else
*/
            bool found=false;
            for (int k=0; k<NoPolygons; k++)
            {
                if (PolyRefData[k][0]==PRef)
                {
                  PolyRefData[k][1]++;
                  found = true;
                  break;
                }
            }
            if (!found)
//*/
      {
        // Don't have this one so get the height & type to the PolyDatas arrays
        PolyRefData[NoPolygons][0]=PRef;
        PolyRefData[NoPolygons][1]=1;
        NoPolygons++;
      }
    }
  }
  // D Loop
  int last=-99999;
  int k_index=-1;
  for (int i=x; i<Dfinx; i++)
  {
    for (int j=y; j<Dfiny; j++)
    {
      // Get the polyref
      int PRef = m_OurLandscape->SupplyPolyRefIndex(i,j);
      // check if we have had this one already
      if (last==PRef)
      {
          PolyRefData[k_index][1]++;
      }
      else
      {
 
            bool found=false;
            for (int k=0; k<NoPolygons; k++)
            {
                if (PolyRefData[k][0]==PRef)
                {
                  PolyRefData[k][1]++;
                  found = true;
                  last = PRef;
                  k_index = k;
                  break;
                }
            }
            if (!found)
            {
                // don't have this one so get the height & type to the PolyDatas arrays
                PolyRefData[NoPolygons][0]=PRef;
                PolyRefData[NoPolygons][1]=1;
                NoPolygons++;
            }
      }
    }
  }
  // End of search algorithm
    /* for each polygon get the quality and multiply by amount of that polygon in the territory sum this to get overall quality */
    for ( int i=0; i<NoPolygons; i++)
    {
       quality+= PolyRefData[i][1]*m_OurPopulation->GetHabitatQuality(PolyRefData[i][0]);
    }
//    return quality;
 
    int Voles = m_OurPopulation->SupplyHowManyVoles(m_Location_x,m_Location_y, m_TerrRange);
    if (Voles > a_ddep) quality /= (Voles-a_ddep);
    // return the total quality
    return quality;
}

References Vole_Population_Manager::GetHabitatQuality(), TAnimal::m_Location_x, TAnimal::m_Location_y, m_MinTerrRange, TAnimal::m_OurLandscape, m_OurPopulation, m_TerrRange, SimH, SimW, Vole_Population_Manager::SupplyHowManyVoles(), and Landscape::SupplyPolyRefIndex().

Referenced by Vole_Male::CanFeed(), Vole_JuvenileMale::Dispersal(), Vole_Male::Dispersal(), Vole_JuvenileFemale::Dispersal(), Vole_JuvenileMale::st_Eval_n_Explore(), Vole_Male::st_Eval_n_Explore(), Vole_JuvenileFemale::st_Evaluate_n_Explore(), Vole_Female::st_Evaluate_n_Explore(), and Vole_Female::st_Special_Explore().

CheckTraps()

void Vole_Base::CheckTraps ( )

protected

Definition at line 2800 of file Vole_all.cpp.

{
    if (m_OurLandscape->SupplyYearNumber() < 10 ) return; // Don't sample until the population has stabilised
        int r = m_TerrRange;
        int vx = m_Location_x;
        int vy = m_Location_y;
        for (int rad = 0; rad <r; rad++) {
            // Two Loops
            for (int x = vx-rad; x<=vx+rad; x++) {
                int y = vy + rad;
                if (m_OurPopulation->IsTrap( x, y ) ) {
                    if (random(1) == 0) {
                        m_intrappos.m_x = x;
                        m_intrappos.m_y = y;
                        m_intrappos.m_EleType = m_OurLandscape->SupplyElementType(x, y);
                        m_intrappos.m_VegType = m_OurLandscape->SupplyVegType(x, y);
                        m_intrappos.m_inAtrap = true;
                        return;
                    }
                }
                y = vy - rad;
                if (m_OurPopulation->IsTrap( x, y ) ) {
                    if (random(1) == 0) {
                        m_intrappos.m_x = x;
                        m_intrappos.m_y = y;
                        m_intrappos.m_EleType = m_OurLandscape->SupplyElementType(x, y);
                        m_intrappos.m_VegType = m_OurLandscape->SupplyVegType(x, y);
                        m_intrappos.m_inAtrap = true;
                        return;
                    }
                }
            }
            for (int y = vy-(rad-1); y<=vy+(rad-1); y++) {
                int x = vx + rad;
                if (m_OurPopulation->IsTrap( x, y ) ) {
                    if (random(1) == 0) {
                        m_intrappos.m_x = x;
                        m_intrappos.m_y = y;
                        m_intrappos.m_EleType = m_OurLandscape->SupplyElementType(x, y);
                        m_intrappos.m_VegType = m_OurLandscape->SupplyVegType(x, y);
                        m_intrappos.m_inAtrap = true;
                        return;
                    }
                }
                x = vx - rad;
                if (m_OurPopulation->IsTrap( x, y ) ) {
                    if (random(1) == 0) {
                        m_intrappos.m_x = x;
                        m_intrappos.m_y = y;
                        m_intrappos.m_EleType = m_OurLandscape->SupplyElementType(x, y);
                        m_intrappos.m_VegType = m_OurLandscape->SupplyVegType(x, y);
                        m_intrappos.m_inAtrap = true;
                        return;
                    }
                }
            }
        }
}

References Vole_Population_Manager::IsTrap(), AnimalPosition::m_EleType, InTrapPosition::m_inAtrap, m_intrappos, TAnimal::m_Location_x, TAnimal::m_Location_y, TAnimal::m_OurLandscape, m_OurPopulation, m_TerrRange, AnimalPosition::m_VegType, AnimalPosition::m_x, AnimalPosition::m_y, Landscape::SupplyElementType(), Landscape::SupplyVegType(), and Landscape::SupplyYearNumber().

Referenced by Vole_JuvenileMale::st_Eval_n_Explore(), Vole_Male::st_Eval_n_Explore(), Vole_JuvenileFemale::st_Evaluate_n_Explore(), and Vole_Female::st_Evaluate_n_Explore().

CopyMyself()

void Vole_Base::CopyMyself

(

VoleObject

a_vtype

)

Duplicates a vole.

Method used to duplicate a vole - most commonly used for experimental manipulation of populations e.g. return rate experiments

Definition at line 313 of file Vole_all.cpp.

                                             {
      struct_Vole_Adult* av;
      av = new struct_Vole_Adult;
      av->VPM = m_OurPopulation;
      av->L = m_OurLandscape;
      av->m_flag=true; // Used to signal pesticide effect to CreateObjects
      av->PolyRefBorn = m_OurLandscape->SupplyPolyRef(m_Location_x, m_Location_y);
      av->ElemBorn = m_OurLandscape->SupplyElementType(av->PolyRefBorn);
      av->VegBorn = m_OurLandscape->SupplyVegType(m_Location_x, m_Location_y);
      av->x = ((m_Location_x+1)%m_OurPopulation->SimW);
      av->y = ((m_Location_y)%m_OurPopulation->SimH);
      // Do the genetics
      av->Genes.Recombine(&m_MyGenes,&m_MyGenes);
      m_OurPopulation->CreateObjects(a_vtype,this,av,1);
      // object will be destroyed by death state
      // but must let Dad know anyway
      delete av;
}

References Vole_Population_Manager::CreateObjects(), struct_Vole_Adult::ElemBorn, struct_Vole_Adult::Genes, struct_Vole_Adult::L, struct_Vole_Adult::m_flag, TAnimal::m_Location_x, TAnimal::m_Location_y, m_MyGenes, TAnimal::m_OurLandscape, m_OurPopulation, struct_Vole_Adult::PolyRefBorn, GeneticMaterial::Recombine(), Population_Manager::SimH, Population_Manager::SimW, Landscape::SupplyElementType(), Landscape::SupplyPolyRef(), Landscape::SupplyVegType(), struct_Vole_Adult::VegBorn, struct_Vole_Adult::VPM, struct_Vole_Adult::x, and struct_Vole_Adult::y.

Referenced by Vole_Population_Manager::Catastrophe().

DoWalking()

void Vole_Base::DoWalking ( int  p_Distance, int &  p_Vector, int &  vx, int &  vy  )

protected

Walking.

This method does the actual stepping - there is no look ahead here, so steps are taken one at a time based on the habitat type and vector given.

Definition at line 953 of file Vole_all.cpp.

{
    int t[5], q[5];
    t[0] = p_Vector;
    t[1] = (p_Vector+1) & 0x07;
    t[2] = (p_Vector+7) & 0x07;
    t[3] = (p_Vector+2) & 0x07;
    t[4] = (p_Vector+6) & 0x07;
//*/
    for (int i=0; i<p_Distance; i++)
    {
        // test the squares at Vector, Vector+1+2, Vector-1-2
        // They have either a quality or are inaccessible (water,buildings)
        // if can go to one of these squares then pick the best one
        // if all or some are equal then take a random pick.
        // if all are 'bad' then add or subtract one from vector and try again
 
/*  t[0] = p_Vector;
    t[1] = (p_Vector+1) & 0x07;
    t[2] = (p_Vector+7) & 0x07;
    t[3] = (p_Vector+2) & 0x07;
    t[4] = (p_Vector+6) & 0x07; */
 
        q[0] = MoveQuality((vx+Vector_x[t[0]]),(vy+Vector_y[t[0]]));
        q[1] = MoveQuality((vx+Vector_x[t[1]]),(vy+Vector_y[t[1]]));
        q[2] = MoveQuality((vx+Vector_x[t[2]]),(vy+Vector_y[t[2]]));
        q[3] = MoveQuality((vx+Vector_x[t[3]]),(vy+Vector_y[t[3]]));
        q[4] = MoveQuality((vx+Vector_x[t[4]]),(vy+Vector_y[t[4]]));
        if (g_rand_uni() < MoveToLessFavourable)
        {
          // allow a mistake once in a while
          for (int j=1; j<5; j++) q[j]=-1;
        }
        // Now pick the best of these
        int best = q[0];
        int score=1;
        for (int ii=1; ii<5; ii++)
        {
            if (q[ii]>best)
            {
              best=q[ii];
              score=1;
            }
            else if (q[ii]==best) score++;
        }
        if (best==-1)
        {
            // can't go anywhere so change the vector
            if (random(2)) ++p_Vector; else (--p_Vector);
            p_Vector&=0x07;
            t[0] = p_Vector;
            t[1] = (p_Vector+1) & 0x07;
            t[2] = (p_Vector+7) & 0x07;
            t[3] = (p_Vector+2) & 0x07;
            t[4] = (p_Vector+6) & 0x07;
//*/
        }
        else
        {
            // Can go to one of score squares
            int scored=random(score); // pick one
            int loop=0;
            for (int ii=0; ii<5; ii++)
            {
              if (best==q[ii]) loop++; // count the squares with 'best' quality
              if (loop>scored)
              {
                loop=ii; // go to i-square
                break;
              }
            }
            // change co-ordinates
            vx+=Vector_x[t[loop]];
            vy+=Vector_y[t[loop]];
        }
    }
}

References g_rand_uni, MoveQuality(), MoveToLessFavourable, Vector_x, and Vector_y.

Referenced by MoveTo().

DoWalkingCorrect()

void Vole_Base::DoWalkingCorrect ( int  p_Distance, int &  p_Vector, int &  vx, int &  vy  )

protected

Walking where there is a danger of stepping off the world.

This method does the actual stepping - there is no look ahead here, so steps are taken one at a time based on the habitat type and vector given.
This version corrects coords for wrap around. This is slower so is only called when necessary.

Definition at line 1041 of file Vole_all.cpp.

{
    int t[5], q[5];
    t[0] = p_Vector;
    t[1] = (p_Vector+1) & 0x07;
    t[2] = (p_Vector+7) & 0x07;
    t[3] = (p_Vector+2) & 0x07;
    t[4] = (p_Vector+6) & 0x07;
    //*/
    for (int i=0; i<p_Distance; i++)
    {
      // test the squares at Vector, Vector+1+2, Vector-1-2
      // They have either a quality or are inaccessible (water,buildings)
      // if can go to one of these squares then pick the best one
      // if all or some are equal then take a random pick.
      // if all are 'bad' then add or subtract one from vector and try again
     /* t[0] = p_Vector;
      t[1] = (p_Vector+1) & 0x07;
      t[2] = (p_Vector+7) & 0x07;
      t[3] = (p_Vector+2) & 0x07;
      t[4] = (p_Vector+6) & 0x07; */
      q[0] = MoveQuality((vx+Vector_x[t[0]])%SimW, (vy+Vector_y[t[0]])%SimH);
      q[1] = MoveQuality((vx+Vector_x[t[1]])%SimW,(vy+Vector_y[t[1]])%SimH);
      q[2] = MoveQuality((vx+Vector_x[t[2]])%SimW,(vy+Vector_y[t[2]])%SimH);
      q[3] = MoveQuality((vx+Vector_x[t[3]])%SimW,(vy+Vector_y[t[3]])%SimH);
      q[4] = MoveQuality((vx+Vector_x[t[4]])%SimW,(vy+Vector_y[t[4]])%SimH);
      if (g_rand_uni()<MoveToLessFavourable)
      {
        // allow a mistake once in a while
        for (int j=1; j<5; j++) q[j]=-1;
      }
      // Now pick the best of these
      int best = q[0];
      int score=1;
      for (int ii=1; ii<5; ii++)
      {
        if (q[ii]>best)
        {
          best=q[ii];
          score=1;
        }
        else
        if (q[ii]==best) score++;
      }
      if (best==-1)
      {
        // can't go anywhere so change the vector
        if (random(2)) ++p_Vector; else (--p_Vector);
        p_Vector&=0x07;
       // /*
        t[0] = p_Vector;
        t[1] = (p_Vector+1) & 0x07;
        t[2] = (p_Vector+7) & 0x07;
        t[3] = (p_Vector+2) & 0x07;
        t[4] = (p_Vector+6) & 0x07; //*/
      }
      else
      {
        // Can go to one of score squares
        int scored=random(score); // pick one
        int loop=0;
        for (int ii=0; ii<5; ii++)
        {
          if (best==q[ii]) loop++; // count the squares with 'best' quality
          if (loop>scored)
          {
            loop=ii; // go to i-square
            break;
          }
        }
        // change co-ordinates
        vx+=Vector_x[t[loop]];
        vy+=Vector_y[t[loop]];
      }
    }
}

References g_rand_uni, MoveQuality(), MoveToLessFavourable, SimH, SimW, Vector_x, and Vector_y.

Referenced by MoveTo().

EndStep()

void Vole_Base::EndStep ( void  )

virtual

All voles age at the end of the day.

Reimplemented from TAnimal.

Reimplemented in Vole_JuvenileFemale, Vole_Male, and Vole_JuvenileMale.

Definition at line 336 of file Vole_all.cpp.

{
    m_Age++; // Once a day increment m_Age
}

References m_Age.

Escape()

void Vole_Base::Escape ( int  p_Vector, int  p_Distance  )

protected

Dispersal - directed movement.

This works like MoveTo above, but with a rather more directed movement aimed at moving further from the start point.

Definition at line 1127 of file Vole_all.cpp.

{
    // This will alter m_Location_x & m_Location_y
    // it will give a very directed movement towards p_Vector
 
    // p_Vector gives the preferred direction (0-7)
    // p_Distance is the number of steps
    int vx = m_Location_x+SimW;
    int vy = m_Location_y+SimH;
//    int counter = 0;
    for (int i=0; i<p_Distance; i++)
    {
      // test the squares at Vector, Vector+1+2, Vector-1-2
      // They have either a quality or are inaccessible (water,buildings)
      // if can go to one of these squares then pick the best one
      // if all or some are equal then take a random pick.
      // if all are 'bad' then add or subtract one from p_Vector and try again
//      counter ++;
      int t[3], q[3];
      t[0] = p_Vector;
      t[1] = (p_Vector+1) & 0x07;
      t[2] = (p_Vector+7) & 0x07;
      q[0] = MoveQuality((vx+Vector_x[t[0]])%SimW,(vy+Vector_y[t[0]])%SimH);
      q[1] = MoveQuality((vx+Vector_x[t[1]])%SimW,(vy+Vector_y[t[1]])%SimH);
      q[2] = MoveQuality((vx+Vector_x[t[2]])%SimW,(vy+Vector_y[t[2]])%SimH);
      // Now pick the best of these
      int noscore=0;
      for (int ii=0; ii<3; ii++)
      {
        if (q[ii]==-1)
        {
          noscore++;
        }
      }
      if (noscore==3)
      {
        // can't go anywhere so change the vector
        if (random(2)) p_Vector++; else p_Vector--;
      }
      else
      {
        // Can go to at least one of score squares
        // try the middle first
        int loop=0;
        if (q[0]==-1)
        {
          // otherwise randomly try one side or other
          // it must be possible to go to one of these
          int which=random(2);
          if (which==1)
          {
            if (q[1]!=-1) loop=1; else loop=2;
          }
          else
          {
            if (q[2]!=-1) loop=2; else loop=1;
          }
        }
        // change co-ordinates
        vx+=Vector_x[t[loop]];
        vy+=Vector_y[t[loop]];
      }
    }
  // alter the voles location
  FreeLocation();
  m_Location_x=vx%SimW;
  m_Location_y=vy%SimH;
  SetLocation();
}

References FreeLocation(), TAnimal::m_Location_x, TAnimal::m_Location_y, MoveQuality(), SetLocation(), SimH, SimW, Vector_x, and Vector_y.

FreeLocation()

virtual void Vole_Base::FreeLocation ( )

inlineprotectedvirtual

Reimplemented in Vole_JuvenileFemale, and Vole_JuvenileMale.

Definition at line 440 of file vole_all.h.

{};

Referenced by Escape(), MoveTo(), and st_Dying().

GetDirectFlag()

int Vole_Base::GetDirectFlag ( )

inline

Genetic functionality

Definition at line 392 of file vole_all.h.

{ return m_MyGenes.GetDirectFlag(); }

References GeneticMaterial::GetDirectFlag(), and m_MyGenes.

Referenced by Vole_Population_Manager::GeneticsOutputFile(), and Vole_Population_Manager::ImpactedProbe().

GetFertile()

bool Vole_Base::GetFertile ( )

inline

Get the male vole fertility.

Primarily used in ecotoxicological simulations where toxic effects may render the vole sterile.

Definition at line 424 of file vole_all.h.

                      {
        return m_fertile;
    }

References m_fertile.

Referenced by Vole_Female::st_Mating().

GetGeneticFlag()

int Vole_Base::GetGeneticFlag ( )

inline

Genetic functionality

Definition at line 390 of file vole_all.h.

{ return m_MyGenes.GetGeneticFlag(); }

References GeneticMaterial::GetGeneticFlag(), and m_MyGenes.

Referenced by Vole_Population_Manager::GeneticsOutputFile(), and Vole_Population_Manager::ImpactedProbe().

GetLocation()

virtual bool Vole_Base::GetLocation ( int  , int    )

inlineprotectedvirtual

Reimplemented in Vole_JuvenileFemale, and Vole_JuvenileMale.

Definition at line 441 of file vole_all.h.

{return false;};

Referenced by MoveTo().

Init()

void Vole_Base::Init ( struct_Vole_Adult *  p_aVoleStruct )

virtual

Definition at line 240 of file Vole_all.cpp.

    {
        m_Location_x = p_aVoleStruct->x;
        m_Location_y = p_aVoleStruct->y;
        m_OurLandscape = p_aVoleStruct->L;
        m_CurrentStateNo = 0;
        m_OurPopulation = p_aVoleStruct->VPM;
        m_Mature = false;
        m_Age = 0;
        m_Weight = 0.5;
        m_NoOfYoungTotal = 0;
        m_DispVector = -1;
        m_Have_Territory = false;
        m_TerrRange = 0;  // The size of the territory
        m_MinTerrRange = 0;
        m_Reserves = 3;
        m_LifeSpan = (365 + 60) + int(g_rand_uni()*(30 * cfg_vole_LifeMonths.value())); //
        CurrentVState = tovs_InitialState;
        m_intrappos.m_inAtrap = false;
        m_BornLastYear = false;
 
        m_MyGenes = p_aVoleStruct->Genes;
        SimH = m_OurPopulation->SimH;
        SimW = m_OurPopulation->SimW;
        IDNo = m_OurPopulation->IDNumber++;
 
        unsigned FatherIdNo = p_aVoleStruct->FatherId;
        Set_FatherId(FatherIdNo);
        unsigned MotherIdNo = p_aVoleStruct->MotherId;
        Set_MotherId(MotherIdNo);
        Set_XBorn(m_Location_x);
        Set_YBorn(m_Location_y);
        Set_PolyRefBorn(m_Location_x, m_Location_y);
        Set_VegBorn(m_Location_x, m_Location_y);
        Set_ElemBorn(m_Location_x, m_Location_y);
        Set_BirthYear(p_aVoleStruct->BirthYear);
 
        m_MinMaleTerritorySize = cfg_MinMaleTerritorySize.value();
        m_MaxMaleTerritorySize = cfg_MaxMaleTerrSize.value();
        if (m_MaxMaleTerritorySize < m_MinMaleTerritorySize) m_MaxMaleTerritorySize = m_MinMaleTerritorySize; // Corrects a bug caused by incorrect input settings
        m_MinFemaleTerritorySize = cfg_MinFemaleTerritorySize.value();
        m_MaxFemaleTerritorySize = cfg_MaxFemaleTerrSize.value();
        if (m_MaxFemaleTerritorySize < m_MinFemaleTerritorySize) m_MaxFemaleTerritorySize = m_MinFemaleTerritorySize; // Corrects a bug caused by incorrect input settings
        m_MinFVoleHabQual = cfg_vole_habqualscaler.value() * (4 * m_MinFemaleTerritorySize * m_MinFemaleTerritorySize);
        m_MinMVoleHabQual = cfg_vole_habqualscaler.value() * (4 * m_MinMaleTerritorySize * m_MinMaleTerritorySize);
        m_MinJMVoleHabQual = cfg_vole_habqualscaler.value() * (4 * m_MinFemaleTerritorySize * m_MinFemaleTerritorySize); // Yes this should be female
        m_MaleTerritoryRangeSlope = (m_MaxMaleTerritorySize - m_MinMaleTerritorySize) / (MaxWeightM - MinReproWeightM);
        m_FemaleTerritoryRangeSlope = (m_MaxFemaleTerritorySize - m_MinFemaleTerritorySize) / (MaxWeightF - MinReproWeightF);
#ifdef __VoleStarvationDays
        m_StarvationDays = 0;
        m_MaxStarvationDays = cfg_MaxStarvationDays.value();
#endif
#ifdef __VOLEPESTICIDEON
        ClearPesticidLoad();
        m_pesticideBioDegradeRate = cfg_volepcidebiodegredrate.value();
        SetPesticideInfluenced1(false);
        SetPesticideInfluenced2(false);
        m_pesticideInfluenced3 = 0.0;
#endif
        m_fertile = true;
    }

References struct_Vole_Adult::BirthYear, cfg_MaxFemaleTerrSize(), cfg_MaxMaleTerrSize(), cfg_MaxStarvationDays(), cfg_MinFemaleTerritorySize(), cfg_MinMaleTerritorySize(), cfg_vole_habqualscaler(), cfg_vole_LifeMonths(), cfg_volepcidebiodegredrate(), CurrentVState, struct_Vole_Adult::FatherId, g_rand_uni, struct_Vole_Adult::Genes, IDNo, Vole_Population_Manager::IDNumber, struct_Vole_Adult::L, m_Age, m_BornLastYear, TALMaSSObject::m_CurrentStateNo, m_DispVector, m_FemaleTerritoryRangeSlope, m_fertile, m_Have_Territory, InTrapPosition::m_inAtrap, m_intrappos, m_LifeSpan, TAnimal::m_Location_x, TAnimal::m_Location_y, m_MaleTerritoryRangeSlope, m_Mature, m_MaxFemaleTerritorySize, m_MaxMaleTerritorySize, m_MinFemaleTerritorySize, m_MinFVoleHabQual, m_MinJMVoleHabQual, m_MinMaleTerritorySize, m_MinMVoleHabQual, m_MinTerrRange, m_MyGenes, m_NoOfYoungTotal, TAnimal::m_OurLandscape, m_OurPopulation, m_Reserves, m_TerrRange, m_Weight, MaxWeightF, MaxWeightM, MinReproWeightF, MinReproWeightM, struct_Vole_Adult::MotherId, Set_BirthYear(), Set_ElemBorn(), Set_FatherId(), Set_MotherId(), Set_PolyRefBorn(), Set_VegBorn(), Set_XBorn(), Set_YBorn(), SimH, Population_Manager::SimH, SimW, Population_Manager::SimW, tovs_InitialState, struct_Vole_Adult::VPM, struct_Vole_Adult::x, and struct_Vole_Adult::y.

Referenced by ReInit(), Vole_JuvenileMale::ReInit(), Vole_Male::ReInit(), Vole_JuvenileFemale::ReInit(), Vole_Female::ReInit(), and Vole_Base().

MortalityTest()

bool Vole_Base::MortalityTest ( )

virtual

Do a mortality test.

Takes both physiological lifespan and background mortality into account to determine whether the vole should die - repeated calls increase the risk of dying

Reimplemented in Vole_Male.

Definition at line 362 of file Vole_all.cpp.

{
    // returns true if the vole should die
    if (g_rand_uni() < g_DailyMortChance) {
        return true;
    }
    // returns true if the vole should die
    return false;
}

References g_DailyMortChance, and g_rand_uni.

Referenced by Vole_JuvenileMale::BeginStep(), and Vole_JuvenileFemale::BeginStep().

MoveQuality()

int Vole_Base::MoveQuality ( int  p_x, int  p_y  )

protected

Test a location for quality while moving.

Returns the quality of a patch of habitat at p_x,p_y.
Can't walk through another vole though - so test location first.

Definition at line 1207 of file Vole_all.cpp.

{
    if (m_OurPopulation->m_VoleMap->GetMapValue(p_x,p_y)!=NULL) return -1;
    // Nobody there so carry on
    int poly_index=m_OurLandscape->SupplyPolyRefIndex(p_x,p_y);
    int score = -9999;
    TTypesOfLandscapeElement tole = m_OurLandscape->SupplyElementTypeFromVector(poly_index);
    switch (tole)
    {
    case tole_NaturalGrassDry: // 110
    case tole_NaturalGrassWet: // 110
    case tole_BeetleBank:
        score=4;
        break;
    case tole_PermPasture: // 35
        if (m_OurLandscape->SupplyGrazingPressureVector(poly_index) > 0 ) score=1; else score=4;
        break;
    case tole_PermPastureLowYield: // 35
        if (m_OurLandscape->SupplyGrazingPressureVector(poly_index) > 0 ) score = 1; else score = 4;
        break;
    case tole_PermPastureTussocky:
        if (m_OurLandscape->SupplyGrazingPressureVector(poly_index) > 0 ) score = 2; else score = 4;
        break;
    case tole_Orchard: // 56
        // Quality depends on when it was mown
        if (m_OurLandscape->SupplyJustMownVector(poly_index)) score=0; else
        {
            if (m_OurLandscape->SupplyVegCoverVector(poly_index)<0.8) score = 4;
                else if (m_OurLandscape->SupplyVegHeightVector(poly_index)<=40) score = 4;
                    else score = 4;
        }
 
        break;
    case tole_MownGrass: // 58
        // Quality depends on when it was mown
        if (m_OurLandscape->SupplyJustMownVector(poly_index)) score=1; else score=4;
        break;
    case tole_OrchardBand: // 57
        score = 4 - (int) (0.6*m_OurLandscape->SupplyJustSprayedVector(poly_index));
        break;
    case tole_RoadsideSlope:
    case tole_Railway: // 118
    case tole_FieldBoundary: // 160
    case tole_RoadsideVerge: // 13
    case tole_HedgeBank:
    case tole_PermanentSetaside:
    case tole_YoungForest: // 60
    case tole_Vildtager:
    case tole_Wasteland:
        score = 4;
        break;
    case tole_Saltmarsh: // 95
    case tole_Marsh: // 95
    case tole_Scrub: // 70
    case tole_Heath:
    case tole_Hedges: // 130 (internal ALMaSS representation for Hedges)
    case tole_RiversidePlants: // 98
    case tole_PitDisused: // 75
    case tole_MixedForest: // 60
    case tole_DeciduousForest: // 40
    case tole_Copse:
        score=3;
        break;
    case tole_RiversideTrees: // 97
    case tole_ConiferousForest: // 50
    case tole_BuiltUpWithParkland:
    case tole_Parkland:
    case tole_AmenityGrass:
    case tole_WoodyEnergyCrop:
    case tole_IndividualTree:
        score=2;
        break;
    case tole_Garden: //11
    case tole_Track: // 123
    case tole_SmallRoad: // 122
    case tole_LargeRoad: // 121
    case tole_BareRock:
    case tole_UrbanNoVeg:
    case tole_UrbanPark:
    case tole_SandDune:
    case tole_Churchyard:  //204
        score=1;
        break;
    case tole_MetalledPath:
    case tole_Carpark:
    case tole_Stream:
    case tole_HeritageSite:
    case tole_Building: // 5
    case tole_ActivePit: // 115
    case tole_Freshwater: // 90
    case tole_FishFarm:
    case tole_Pond:
    case tole_River: // 96
    case tole_Saltwater: // 80
    case tole_Coast: // 100
    case tole_StoneWall: // 15
    case tole_Fence: //225
    case tole_WindTurbine:
    case tole_Pylon:
        score=-1;
        break;
    case tole_Field: // 20 & 30
    case tole_UnsprayedFieldMargin:
      {
       TTypesOfVegetation  VType=m_OurLandscape->SupplyVegTypeVector(poly_index);
       switch (VType) {
       case tov_OCloverGrassSilage1:
       case tov_CloverGrassGrazed1:
       case tov_CloverGrassGrazed2:
       case tov_OCloverGrassGrazed1:
       case tov_OCloverGrassGrazed2:
       case tov_OPermanentGrassGrazed:
       case tov_PermanentGrassGrazed:
           score = 3 - m_OurLandscape->SupplyGrazingPressureVector(poly_index);
        break;
       default:
        double cover = m_OurLandscape->SupplyVegCoverVector(poly_index);
        double height = m_OurLandscape->SupplyVegHeightVector(poly_index);
        if ((cover>0.80) && (height>40)) score = 3;
        if ((cover<0.50) || (height<10)) score = 0;
            else score = 2;
        }
      }
      break;
    case tole_Foobar: // 999 !! type unknown - should not happen
    default:
     static char errornum[20];
     sprintf(errornum, "%d", m_OurLandscape->SupplyElementTypeFromVector(poly_index));
     m_OurLandscape->Warn("Vole_Base:MoveQuality: Unknown tole_type",
     errornum);
     exit(1);
  }
  return score;
}

References TAnimal::m_OurLandscape, m_OurPopulation, Vole_Population_Manager::m_VoleMap, Landscape::SupplyElementTypeFromVector(), Landscape::SupplyGrazingPressureVector(), Landscape::SupplyJustMownVector(), Landscape::SupplyJustSprayedVector(), Landscape::SupplyPolyRefIndex(), Landscape::SupplyVegCoverVector(), Landscape::SupplyVegHeightVector(), Landscape::SupplyVegTypeVector(), tole_ActivePit, tole_AmenityGrass, tole_BareRock, tole_BeetleBank, tole_Building, tole_BuiltUpWithParkland, tole_Carpark, tole_Churchyard, tole_Coast, tole_ConiferousForest, tole_Copse, tole_DeciduousForest, tole_Fence, tole_Field, tole_FieldBoundary, tole_FishFarm, tole_Foobar, tole_Freshwater, tole_Garden, tole_Heath, tole_HedgeBank, tole_Hedges, tole_HeritageSite, tole_IndividualTree, tole_LargeRoad, tole_Marsh, tole_MetalledPath, tole_MixedForest, tole_MownGrass, tole_NaturalGrassDry, tole_NaturalGrassWet, tole_Orchard, tole_OrchardBand, tole_Parkland, tole_PermanentSetaside, tole_PermPasture, tole_PermPastureLowYield, tole_PermPastureTussocky, tole_PitDisused, tole_Pond, tole_Pylon, tole_Railway, tole_River, tole_RiversidePlants, tole_RiversideTrees, tole_RoadsideSlope, tole_RoadsideVerge, tole_Saltmarsh, tole_Saltwater, tole_SandDune, tole_Scrub, tole_SmallRoad, tole_StoneWall, tole_Stream, tole_Track, tole_UnsprayedFieldMargin, tole_UrbanNoVeg, tole_UrbanPark, tole_Vildtager, tole_Wasteland, tole_WindTurbine, tole_WoodyEnergyCrop, tole_YoungForest, tov_CloverGrassGrazed1, tov_CloverGrassGrazed2, tov_OCloverGrassGrazed1, tov_OCloverGrassGrazed2, tov_OCloverGrassSilage1, tov_OPermanentGrassGrazed, tov_PermanentGrassGrazed, and Landscape::Warn().

Referenced by DoWalking(), DoWalkingCorrect(), Escape(), and Vole_Male::st_Eval_n_Explore().

MoveTo()

void Vole_Base::MoveTo ( int  p_Vector, int  p_Distance, int  p_iterations  )

protected

Movement.

Do an assessment of the quality of the voles territory, and move. This function does the same as the other CalcuateCarryingCapacity except that it alters the two values stand_x, stand_y to set them to be in the best polygon in the territory

Returns the mean of the qualities in the area covered by the territory (even if the vole does not have one)

Uses the algorithm for fast searching of square arrays with wrap around co-ordinates.
parameters = x,y starting coordinates top left
range = extent of the space to search
bottom left coordinate is therefore x+range, y+range
22/09/2000

For each polygon it gets the quality and multiplies by area of that polygon in the territory. This is summed for all polygons in the territory to get overall quality. This will alter m_Location_x & m_Location_y.
It will give a rather directed movement towards p_Vector.
Generally the vole will stay in the best habitat, but occasional mis-steps occur.
p_Vector gives the preferred direction (0-7), p_Distance is the number of steps.

Definition at line 907 of file Vole_all.cpp.

{
  int offset=p_Distance*p_iterations;
  if ((m_Location_x-offset < 0) ||(m_Location_x+offset >= SimW) || (m_Location_y-offset < 0) ||(m_Location_y+offset >= SimH))
  {
    // Need correct coords
    // Make sure that the coords can't become -ve
    int vx = m_Location_x+SimW;
    int vy = m_Location_y+SimH;
    do
    {
      DoWalkingCorrect(p_Distance,p_Vector,vx,vy);
      p_Distance=1;
    } while ((GetLocation(vx%SimW,vy%SimH)) && (p_iterations-->0));
    // alter the voles location (& correct coords)
    FreeLocation();
    m_Location_x=vx%SimW;
    m_Location_y=vy%SimH;
    SetLocation();
  }
  else
  {
    // Don't need correct coords
    int vx = m_Location_x;
    int vy = m_Location_y;
    do
    {
      DoWalking(p_Distance,p_Vector,vx,vy);
      p_Distance=1;
    } while ((GetLocation(vx,vy)) && (p_iterations-->0));
    // alter the voles location (& correct coords)
    FreeLocation();
    m_Location_x=vx;
    m_Location_y=vy;
    SetLocation();
  }
}

References DoWalking(), DoWalkingCorrect(), FreeLocation(), GetLocation(), TAnimal::m_Location_x, TAnimal::m_Location_y, SetLocation(), SimH, and SimW.

Referenced by Vole_JuvenileMale::Dispersal(), Vole_Male::Dispersal(), Vole_JuvenileFemale::Dispersal(), Vole_JuvenileMale::st_JuvenileExplore(), and Vole_Female::st_Special_Explore().

OnKilled()

virtual void Vole_Base::OnKilled ( )

inlinevirtual

Reimplemented in Vole_JuvenileFemale, and Vole_JuvenileMale.

Definition at line 404 of file vole_all.h.

{};

ReInit()

void Vole_Base::ReInit ( struct_Vole_Adult *  p_aVoleStruct )

virtual

Reimplemented in Vole_Female, Vole_JuvenileFemale, Vole_Male, and Vole_JuvenileMale.

Definition at line 235 of file Vole_all.cpp.

                                                            {
        Init(p_aVoleStruct);
    }

References Init().

RodenticideIngestion()

void Vole_Base::RodenticideIngestion ( void  )

protectedvirtual

Definition at line 3343 of file Vole_all.cpp.

{
    double rodenticide = m_OurLandscape->SupplyRodenticide(m_Location_x, m_Location_y);
    if (rodenticide>0)  { 
 
        // Todo effects
    }
    else return;
}

References TAnimal::m_Location_x, TAnimal::m_Location_y, TAnimal::m_OurLandscape, and Landscape::SupplyRodenticide().

Set_Age()

void Vole_Base::Set_Age ( int  Age )

inline

Set our age

Definition at line 329 of file vole_all.h.

{m_Age=Age;}

References m_Age.

Referenced by Vole_Population_Manager::CreateObjects_Init().

Set_BirthYear()

void Vole_Base::Set_BirthYear ( int  BirthYear )

inline

Set year of birth

Definition at line 302 of file vole_all.h.

{m_BirthYear = BirthYear;}

References m_BirthYear.

Referenced by Vole_Population_Manager::CreateObjects_Init(), and Init().

Set_ElemBorn()

void Vole_Base::Set_ElemBorn ( int  a_Location_x, int  a_Location_y  )

inline

Set element type of birth location

Definition at line 315 of file vole_all.h.

    {
            TTypesOfLandscapeElement m_EBorn = m_OurLandscape->SupplyElementType(a_Location_x, a_Location_y);
            m_ElemBorn = m_OurLandscape->BackTranslateEleTypes(m_EBorn);
    }

References Landscape::BackTranslateEleTypes(), m_ElemBorn, TAnimal::m_OurLandscape, and Landscape::SupplyElementType().

Referenced by Init().

Set_FatherId()

void Vole_Base::Set_FatherId ( unsigned  FatherIdNo )

inline

Set father ID

Definition at line 307 of file vole_all.h.

{m_FatherId = FatherIdNo;}; // ***TD***

References m_FatherId.

Referenced by Init().

Set_MotherId()

void Vole_Base::Set_MotherId ( unsigned  MotherIdNo )

inline

Set mother ID

Definition at line 305 of file vole_all.h.

{m_MotherId = MotherIdNo;}; // ***TD***

References m_MotherId.

Referenced by Init().

Set_NoYoungTot()

void Vole_Base::Set_NoYoungTot ( int  a_NoOfYoung )

inline

Sets the number of young produced by the female

Definition at line 309 of file vole_all.h.

{m_NoOfYoungTotal+=a_NoOfYoung;}; // ***TD***

References m_NoOfYoungTotal.

Set_PolyRefBorn()

void Vole_Base::Set_PolyRefBorn ( int  a_Location_x, int  a_Location_y  )

inline

Set polygonref of birth location

Definition at line 327 of file vole_all.h.

{m_PolyRefBorn = (m_OurLandscape->SupplyPolyRef(a_Location_x, a_Location_y));}; // ***TD***

References TAnimal::m_OurLandscape, m_PolyRefBorn, and Landscape::SupplyPolyRef().

Referenced by Init().

Set_VegBorn()

void Vole_Base::Set_VegBorn ( int  a_Location_x, int  a_Location_y  )

inline

Set vegetation type of birth location

Definition at line 321 of file vole_all.h.

    {
            TTypesOfVegetation m_VBorn = (m_OurLandscape->SupplyVegType(a_Location_x, a_Location_y));
            m_VegBorn = (m_OurLandscape->BackTranslateVegTypes(m_VBorn));
    }

References Landscape::BackTranslateVegTypes(), TAnimal::m_OurLandscape, m_VegBorn, and Landscape::SupplyVegType().

Referenced by Init().

Set_XBorn()

void Vole_Base::Set_XBorn ( int  a_Location_x )

inline

Set x-coordinate of birth location

Definition at line 311 of file vole_all.h.

{m_XBorn = a_Location_x;}; // ***TD***

References m_XBorn.

Referenced by Init().

Set_YBorn()

void Vole_Base::Set_YBorn ( int  a_Location_y )

inline

Set y-coordinate of birth location

Definition at line 313 of file vole_all.h.

{m_YBorn = a_Location_y;}; // ***TD***

References m_YBorn.

Referenced by Init().

SetBreedingSeason()

void Vole_Base::SetBreedingSeason ( bool  a_flag )

inline

Set Breeding Season flag.

Definition at line 296 of file vole_all.h.

{ m_BreedingSeason = a_flag; }

References m_BreedingSeason.

SetDirectFlag()

void Vole_Base::SetDirectFlag ( )

inline

Genetic functionality

Definition at line 396 of file vole_all.h.

{ m_MyGenes.SetDirectFlag(); }

References m_MyGenes, and GeneticMaterial::SetDirectFlag().

Referenced by Vole_Population_Manager::CreateObjects().

SetFertile()

void Vole_Base::SetFertile ( bool  f )

inline

Set the male vole fertility.

Primarily used in ecotoxicological simulations where toxic effects may render the vole sterile.

Definition at line 414 of file vole_all.h.

                            {
        m_fertile=f;
    }

References m_fertile.

Referenced by Vole_Population_Manager::CreateObjects(), and Vole_Population_Manager::CreateObjects_Init().

SetFree()

void Vole_Base::SetFree ( )

inline

Release vole from trap

Definition at line 380 of file vole_all.h.

{ m_intrappos.m_inAtrap = false; }

References InTrapPosition::m_inAtrap, and m_intrappos.

Referenced by Vole_Population_Manager::DoFirst().

SetGeneticFlag()

void Vole_Base::SetGeneticFlag ( )

inline

Genetic functionality

Definition at line 394 of file vole_all.h.

{ m_MyGenes.SetGeneticFlag(); }

References m_MyGenes, and GeneticMaterial::SetGeneticFlag().

Referenced by Vole_Population_Manager::CreateObjects().

SetLocation()

virtual void Vole_Base::SetLocation ( )

inlineprotectedvirtual

Reimplemented in Vole_JuvenileFemale, and Vole_JuvenileMale.

Definition at line 439 of file vole_all.h.

{};

Referenced by Escape(), and MoveTo().

Setm_Mature()

void Vole_Base::Setm_Mature ( )

inline

Become adult

Definition at line 300 of file vole_all.h.

{ m_Mature = true; }

References m_Mature.

Referenced by Vole_Population_Manager::CreateObjects_Init(), Vole_Female::st_BecomeReproductive(), Vole_Male::st_Eval_n_Explore(), and Vole_Male::Step().

SetWeight()

void Vole_Base::SetWeight ( double  W )

inline

Set our weight

Definition at line 298 of file vole_all.h.

{m_Weight=W;}

References m_Weight.

Referenced by Vole_Population_Manager::CreateObjects_Init().

st_Dying()

void Vole_Base::st_Dying

(

)

All voles end here on death.

Called when a vole dies. Just removes itself from the map and sets a flag to destroy the object in the endStep

Definition at line 348 of file Vole_all.cpp.

{
   FreeLocation();
   m_CurrentStateNo=-1;
}

References FreeLocation(), and TALMaSSObject::m_CurrentStateNo.

Referenced by Vole_JuvenileMale::EndStep(), Vole_Male::EndStep(), and Vole_JuvenileFemale::EndStep().

Step()

virtual void Vole_Base::Step ( void  )

inlinevirtual

Step behaviour - must be implemented in descendent classes.

Reimplemented from TAnimal.

Reimplemented in Vole_Female, Vole_JuvenileFemale, Vole_Male, and Vole_JuvenileMale.

Definition at line 291 of file vole_all.h.

{};

SupplyAge()

unsigned Vole_Base::SupplyAge ( )

inline

Tell our age

Definition at line 370 of file vole_all.h.

{return m_Age;};

References m_Age.

Referenced by Vole_Population_Manager::DoFirst(), Vole_Population_Manager::GeneticsOutputFile(), Vole_Population_Manager::SupplyInOlderTerr(), Vole_Population_Manager::SupplyOlderFemales(), Vole_Population_Manager::TheAgeSexLocationProbe(), and Vole_Population_Manager::TheReallyBigOutputProbe().

SupplyAllele()

int Vole_Base::SupplyAllele ( int  locus, int  allele  )

inline

Genetic functionality

Definition at line 386 of file vole_all.h.

{ return m_MyGenes.GetAllele(locus,allele); }

References GeneticMaterial::GetAllele(), and m_MyGenes.

Referenced by Vole_Population_Manager::DoFirst(), and Vole_Population_Manager::GeneticsResultsOutput().

SupplyBirthYear()

int Vole_Base::SupplyBirthYear ( )

inline

Tell our birth year

Definition at line 344 of file vole_all.h.

{return m_BirthYear;}; // ***TD***

References m_BirthYear.

Referenced by Vole_Population_Manager::GeneticsOutputFile().

SupplyBornLastYear()

bool Vole_Base::SupplyBornLastYear ( )

inline

Were we born this year?

Definition at line 334 of file vole_all.h.

{ return m_BornLastYear; }

References m_BornLastYear.

Referenced by Vole_Population_Manager::TheSexRatiosProbe().

SupplyDeathCause()

int Vole_Base::SupplyDeathCause ( )

inline

Tell the cause of death

Definition at line 368 of file vole_all.h.

{return m_Death;}; // ***TD***

References m_Death.

SupplyElemBorn()

int Vole_Base::SupplyElemBorn ( )

inline

Tell our elementype at birth location

Definition at line 354 of file vole_all.h.

{return m_ElemBorn;}; // ***TD***

References m_ElemBorn.

Referenced by Vole_Population_Manager::GeneticsOutputFile().

SupplyElemType()

TTypesOfLandscapeElement Vole_Base::SupplyElemType ( )

inline

Provide our current elementype

Definition at line 356 of file vole_all.h.

{ return m_OurLandscape->SupplyElementType(m_Location_x, m_Location_y ); };

References TAnimal::m_Location_x, TAnimal::m_Location_y, TAnimal::m_OurLandscape, and Landscape::SupplyElementType().

SupplyFatherId()

int Vole_Base::SupplyFatherId ( )

inline

Tell father ID

Definition at line 338 of file vole_all.h.

{return m_FatherId;}; // ***TD***

References m_FatherId.

SupplyGenes()

GeneticMaterial Vole_Base::SupplyGenes ( )

inline

Genetic functionality

Definition at line 402 of file vole_all.h.

{return m_MyGenes;}

References m_MyGenes.

Referenced by Vole_Female::st_Mating().

SupplyHeteroZyg()

int Vole_Base::SupplyHeteroZyg ( )

inline

Genetic functionality

Definition at line 384 of file vole_all.h.

{return m_MyGenes.HeterozygosityCount();}

References GeneticMaterial::HeterozygosityCount(), and m_MyGenes.

SupplyHomoZyg()

int Vole_Base::SupplyHomoZyg ( )

inline

Genetic functionality

Definition at line 382 of file vole_all.h.

{return m_MyGenes.HomozygosityCount();}

References GeneticMaterial::HomozygosityCount(), and m_MyGenes.

SupplyIDNo()

int Vole_Base::SupplyIDNo ( )

inline

Tell our ID number

Definition at line 364 of file vole_all.h.

{return IDNo;}; // ***TD***

References IDNo.

Referenced by Vole_Population_Manager::DoFirst(), Vole_Population_Manager::GeneticsOutputFile(), Vole_Female::st_Lactating(), and Vole_Female::st_Mating().

SupplyInTrap()

bool Vole_Base::SupplyInTrap ( )

inline

Are we in a trap?

Definition at line 376 of file vole_all.h.

{ return m_intrappos.m_inAtrap; }

References InTrapPosition::m_inAtrap, and m_intrappos.

Referenced by Vole_Population_Manager::DoFirst().

SupplyMature()

bool Vole_Base::SupplyMature ( )

inline

Tell if mature

Definition at line 366 of file vole_all.h.

{return m_Mature;};

References m_Mature.

Referenced by Vole_Population_Manager::GeneticsOutputFile(), and Vole_Population_Manager::TheSexRatiosProbe().

SupplyMotherId()

int Vole_Base::SupplyMotherId ( )

inline

Tell mother ID

Definition at line 340 of file vole_all.h.

{return m_MotherId;};   // ***TD***

References m_MotherId.

SupplyMyAllele()

uint32 Vole_Base::SupplyMyAllele ( int  i, int  j  )

inline

Definition at line 387 of file vole_all.h.

                                        {return m_MyGenes.GetAllele(i, j);} //*TD

References GeneticMaterial::GetAllele(), and m_MyGenes.

Referenced by Vole_Population_Manager::GeneticsOutputFile(), Vole_Population_Manager::GetVoleAllele(), and Vole_Population_Manager::ResistanceOutput().

SupplyPolyRefBorn()

int Vole_Base::SupplyPolyRefBorn ( )

inline

Tell our polygon ref at birth location

Definition at line 352 of file vole_all.h.

{return m_PolyRefBorn;}; // ***TD***

References m_PolyRefBorn.

Referenced by Vole_Population_Manager::GeneticsOutputFile().

SupplySex()

bool Vole_Base::SupplySex ( )

inline

Tell our sex

Definition at line 342 of file vole_all.h.

{return m_Sex;}; 

References m_Sex.

Referenced by Vole_Population_Manager::FindClosestFemale(), Vole_Population_Manager::FindClosestMale(), Vole_Population_Manager::FindWithinRadiusMale(), Vole_Population_Manager::GeneticsOutputFile(), Vole_Population_Manager::ListClosestFemales(), Vole_Population_Manager::ListClosestMales(), Vole_Population_Manager::SupplyCountFemales(), Vole_Population_Manager::SupplyInOlderTerr(), and Vole_Population_Manager::SupplyOlderFemales().

SupplyTerritorial()

bool Vole_Base::SupplyTerritorial ( )

inline

Tell whether we have a territory

Definition at line 336 of file vole_all.h.

{return m_Have_Territory;} // ***TD***

References m_Have_Territory.

Referenced by Vole_Population_Manager::DoFirst(), Vole_Population_Manager::FindClosestFemale(), Vole_Population_Manager::FindClosestMale(), Vole_Population_Manager::FindOutsideRadiusMale(), Vole_Population_Manager::FindWithinRadiusMale(), Vole_Population_Manager::GeneticsOutputFile(), Vole_Population_Manager::ListClosestFemales(), Vole_Population_Manager::ListClosestMales(), Vole_Population_Manager::SupplyCountFemales(), Vole_Population_Manager::SupplyInOlderTerr(), and Vole_Population_Manager::TheReallyBigOutputProbe().

SupplyTerrRange()

int Vole_Base::SupplyTerrRange ( )

inline

Tell our territory range

Definition at line 360 of file vole_all.h.

{return m_TerrRange;}; // ***TD***

References m_TerrRange.

SupplyTotNoYoung()

int Vole_Base::SupplyTotNoYoung ( )

inline

Tell our number of young produced

Definition at line 346 of file vole_all.h.

{return m_NoOfYoungTotal;}; // ***TD***

References m_NoOfYoungTotal.

SupplyTrapPosition()

InTrapPosition Vole_Base::SupplyTrapPosition ( )

inline

Get the trap location

Definition at line 378 of file vole_all.h.

{ return m_intrappos; }

References m_intrappos.

Referenced by Vole_Population_Manager::DoFirst().

SupplyVegBorn()

int Vole_Base::SupplyVegBorn ( )

inline

Tell our vegetation type at birth location

Definition at line 358 of file vole_all.h.

{return m_VegBorn;}; // ***TD***

References m_VegBorn.

Referenced by Vole_Population_Manager::GeneticsOutputFile().

SupplyWeight()

double Vole_Base::SupplyWeight ( )

inline

Tell our weight

Definition at line 362 of file vole_all.h.

{return m_Weight;};

References m_Weight.

SupplyX()

unsigned Vole_Base::SupplyX ( )

inline

Tell our x coordinate

Definition at line 372 of file vole_all.h.

{return m_Location_x;};

References TAnimal::m_Location_x.

Referenced by Vole_Population_Manager::SendMessage().

SupplyXBorn()

int Vole_Base::SupplyXBorn ( )

inline

Tell our x-coordinate at birth

Definition at line 348 of file vole_all.h.

{return m_XBorn;}; // ***TD***

References m_XBorn.

Referenced by Vole_Population_Manager::DoFirst(), and Vole_Population_Manager::GeneticsOutputFile().

SupplyY()

unsigned Vole_Base::SupplyY ( )

inline

Tell our y coordinate

Definition at line 374 of file vole_all.h.

{return m_Location_y;};

References TAnimal::m_Location_y.

Referenced by Vole_Population_Manager::SendMessage().

SupplyYBorn()

int Vole_Base::SupplyYBorn ( )

inline

Tell our x-coordinate at birth

Definition at line 350 of file vole_all.h.

{return m_YBorn;}; // ***TD***

References m_YBorn.

Referenced by Vole_Population_Manager::DoFirst(), and Vole_Population_Manager::GeneticsOutputFile().

UnsetDirectFlag()

void Vole_Base::UnsetDirectFlag ( )

inline

Genetic functionality

Definition at line 400 of file vole_all.h.

{ m_MyGenes.UnsetDirectFlag(); }

References m_MyGenes, and GeneticMaterial::UnsetDirectFlag().

Referenced by Vole_Population_Manager::CreateObjects().

UnsetGeneticFlag()

void Vole_Base::UnsetGeneticFlag ( )

inline

Genetic functionality

Definition at line 398 of file vole_all.h.

{ m_MyGenes.UnsetGeneticFlag(); }

References m_MyGenes, and GeneticMaterial::UnsetGeneticFlag().

Referenced by Vole_Population_Manager::CreateObjects().

WhatState()

virtual int Vole_Base::WhatState ( )

inlinevirtual

Get our current vole state

Reimplemented from TAnimal.

Definition at line 332 of file vole_all.h.

{return CurrentVState;}

References CurrentVState.

Member Data Documentation

CurrentVState

TTypeOfVoleState Vole_Base::CurrentVState

Our current behavioural state

Definition at line 407 of file vole_all.h.

Referenced by Vole_JuvenileMale::BeginStep(), Vole_JuvenileFemale::BeginStep(), Vole_Population_Manager::Catastrophe(), Vole_JuvenileMale::EndStep(), Vole_Male::EndStep(), Vole_JuvenileFemale::EndStep(), Init(), Vole_JuvenileMale::OnFarmEvent(), Vole_JuvenileFemale::OnFarmEvent(), Vole_JuvenileMale::OnKilled(), Vole_JuvenileFemale::OnKilled(), Vole_JuvenileMale::st_BecomeSubAdult(), Vole_JuvenileFemale::st_BecomeSubAdult(), Vole_Male::st_Eval_n_Explore(), Vole_JuvenileMale::Step(), Vole_Male::Step(), Vole_JuvenileFemale::Step(), Vole_Female::Step(), and WhatState().

IDNo

unsigned Vole_Base::IDNo

protected

Their individual ID number

Definition at line 208 of file vole_all.h.

Referenced by Init(), and SupplyIDNo().

m_Age

int Vole_Base::m_Age

protected

Their age in days

Definition at line 178 of file vole_all.h.

Referenced by Vole_Male::Dispersal(), EndStep(), Vole_JuvenileMale::EndStep(), Vole_Male::EndStep(), Vole_JuvenileFemale::EndStep(), Init(), Vole_JuvenileMale::ReInit(), Vole_Male::ReInit(), Vole_JuvenileFemale::ReInit(), Vole_Female::ReInit(), Set_Age(), Vole_Female::st_BecomeReproductive(), Vole_JuvenileMale::st_BecomeSubAdult(), Vole_JuvenileFemale::st_BecomeSubAdult(), Vole_JuvenileMale::st_Eval_n_Explore(), Vole_Male::st_Eval_n_Explore(), Vole_Female::st_Special_Explore(), Vole_JuvenileFemale::Step(), SupplyAge(), Vole_Female::Vole_Female(), Vole_JuvenileFemale::Vole_JuvenileFemale(), Vole_JuvenileMale::Vole_JuvenileMale(), and Vole_Male::Vole_Male().

m_BirthYear

int Vole_Base::m_BirthYear

protected

The year of birth

Definition at line 157 of file vole_all.h.

Referenced by Vole_Male::ReInit(), Set_BirthYear(), SupplyBirthYear(), and Vole_Male::Vole_Male().

m_BornLastYear

bool Vole_Base::m_BornLastYear

protected

A flag set if the female was born the year before.

Definition at line 162 of file vole_all.h.

Referenced by Vole_JuvenileMale::EndStep(), Vole_Male::EndStep(), Vole_JuvenileFemale::EndStep(), Init(), Vole_JuvenileFemale::ReInit(), Vole_Male::st_Eval_n_Explore(), Vole_Female::st_GiveBirth(), SupplyBornLastYear(), and Vole_JuvenileFemale::Vole_JuvenileFemale().

m_BreedingSeason

bool Vole_Base::m_BreedingSeason = false

staticprotected

Local storage for whether it is breeding season

Definition at line 247 of file vole_all.h.

Referenced by Vole_Male::Dispersal(), SetBreedingSeason(), Vole_Female::st_BecomeReproductive(), Vole_Male::st_Eval_n_Explore(), and Vole_Female::st_Mating().

m_Death

int Vole_Base::m_Death

protected

Death course

Definition at line 170 of file vole_all.h.

Referenced by SupplyDeathCause().

m_DispVector

int Vole_Base::m_DispVector

protected

The current dispersal direction

Definition at line 202 of file vole_all.h.

Referenced by Vole_JuvenileMale::Dispersal(), Vole_Male::Dispersal(), Vole_JuvenileFemale::Dispersal(), Init(), Vole_JuvenileMale::st_Eval_n_Explore(), Vole_Male::st_Eval_n_Explore(), Vole_JuvenileFemale::st_Evaluate_n_Explore(), and Vole_Female::st_Evaluate_n_Explore().

m_ElemBorn

int Vole_Base::m_ElemBorn

protected

The element type at at birth location

Definition at line 186 of file vole_all.h.

Referenced by Set_ElemBorn(), and SupplyElemBorn().

m_FatherId

unsigned Vole_Base::m_FatherId

protected

The id number of the fater

Definition at line 168 of file vole_all.h.

Referenced by Set_FatherId(), Vole_JuvenileMale::st_BecomeSubAdult(), Vole_JuvenileFemale::st_BecomeSubAdult(), and SupplyFatherId().

m_FemaleTerritoryRangeSlope

double Vole_Base::m_FemaleTerritoryRangeSlope = 0

staticprotected

only used to create an increasing territory size with age

Definition at line 232 of file vole_all.h.

Referenced by Vole_JuvenileFemale::EndStep(), and Init().

m_fertile

bool Vole_Base::m_fertile

protected

Flag indicating the fertility state (true means fertile)

Definition at line 194 of file vole_all.h.

Referenced by GetFertile(), Init(), and SetFertile().

m_FHabQualThreshold1

double Vole_Base::m_FHabQualThreshold1

staticprotected

Habitat is v.bad below this

Definition at line 239 of file vole_all.h.

m_FHabQualThreshold2

double Vole_Base::m_FHabQualThreshold2

staticprotected

Habitat is OK above this

Definition at line 237 of file vole_all.h.

m_FHabQualThreshold3

double Vole_Base::m_FHabQualThreshold3

staticprotected

Habitat is v.good above this

Definition at line 235 of file vole_all.h.

m_Have_Territory

bool Vole_Base::m_Have_Territory

protected

Do they have a terriory?

Definition at line 204 of file vole_all.h.

Referenced by Vole_Male::Dispersal(), Vole_Male::EndStep(), Init(), Vole_Male::MortalityTest(), Vole_Female::st_BecomeReproductive(), Vole_Male::st_Eval_n_Explore(), Vole_Female::st_Evaluate_n_Explore(), Vole_Female::st_GiveBirth(), Vole_Female::st_Special_Explore(), and SupplyTerritorial().

m_intrappos

InTrapPosition Vole_Base::m_intrappos

protected

Definition at line 214 of file vole_all.h.

Referenced by CheckTraps(), Init(), SetFree(), SupplyInTrap(), and SupplyTrapPosition().

m_LifeSpan

int Vole_Base::m_LifeSpan

protected

Their lifespan remaining (unless killed by external events)

Definition at line 190 of file vole_all.h.

Referenced by Vole_JuvenileMale::BeginStep(), Vole_JuvenileFemale::BeginStep(), and Init().

m_MaleTerritoryRangeSlope

double Vole_Base::m_MaleTerritoryRangeSlope = 0

staticprotected

only used to create an increasing territory size with age

Definition at line 230 of file vole_all.h.

Referenced by Vole_Male::DetermineTerritorySize(), and Init().

m_Mature

bool Vole_Base::m_Mature

protected

Whether they are mature or not

Definition at line 176 of file vole_all.h.

Referenced by Vole_Male::Dispersal(), Vole_Male::EndStep(), Vole_JuvenileFemale::EndStep(), Init(), Setm_Mature(), Vole_Male::st_Eval_n_Explore(), Vole_Female::st_ReproBehaviour(), Vole_Female::st_Special_Explore(), and SupplyMature().

m_MaxFemaleTerritorySize

unsigned int Vole_Base::m_MaxFemaleTerritorySize = 0

staticprotected

Maximum territory size female

Definition at line 218 of file vole_all.h.

Referenced by Init().

m_MaxMaleTerritorySize

unsigned int Vole_Base::m_MaxMaleTerritorySize = 0

staticprotected

Maximum territory size male

Definition at line 216 of file vole_all.h.

Referenced by Init(), and Vole_Female::st_Mating().

m_MHabQualThreshold1

double Vole_Base::m_MHabQualThreshold1

staticprotected

Habitat is v.bad below this

Definition at line 245 of file vole_all.h.

m_MHabQualThreshold2

double Vole_Base::m_MHabQualThreshold2

staticprotected

Habitat is OK above this

Definition at line 243 of file vole_all.h.

m_MHabQualThreshold3

double Vole_Base::m_MHabQualThreshold3

staticprotected

Habitat is v.good above this

Definition at line 241 of file vole_all.h.

m_MinFemaleTerritorySize

unsigned int Vole_Base::m_MinFemaleTerritorySize = 0

staticprotected

Minimum territory size female

Definition at line 222 of file vole_all.h.

Referenced by Vole_JuvenileFemale::EndStep(), Init(), Vole_JuvenileFemale::ReInit(), Vole_Female::ReInit(), Vole_Female::Vole_Female(), and Vole_JuvenileFemale::Vole_JuvenileFemale().

m_MinFVoleHabQual

double Vole_Base::m_MinFVoleHabQual = 0

staticprotected

Minimum acceptable habitat quality - assumes that minimum hab qual for survival is 2 * min female terr size

Definition at line 224 of file vole_all.h.

Referenced by Init(), Vole_Male::st_Eval_n_Explore(), Vole_JuvenileFemale::st_Evaluate_n_Explore(), and Vole_Female::st_Evaluate_n_Explore().

m_MinJMVoleHabQual

double Vole_Base::m_MinJMVoleHabQual = 0

staticprotected

Minimum acceptable habitat juvenile male quality - assumes that minimum hab qual for survival is 2 * min male terr size

Definition at line 226 of file vole_all.h.

Referenced by Init(), and Vole_JuvenileMale::st_Eval_n_Explore().

m_MinMaleTerritorySize

unsigned int Vole_Base::m_MinMaleTerritorySize = 0

staticprotected

Minimum territory size male

Definition at line 220 of file vole_all.h.

Referenced by Vole_Male::DetermineTerritorySize(), Init(), Vole_JuvenileMale::ReInit(), Vole_Male::ReInit(), Vole_JuvenileMale::Vole_JuvenileMale(), and Vole_Male::Vole_Male().

m_MinMVoleHabQual

double Vole_Base::m_MinMVoleHabQual = 0

staticprotected

Minimum acceptable habitat quality - assumes that minimum hab qual for survival is 2 * min female terr size

Definition at line 228 of file vole_all.h.

Referenced by Vole_Male::CanFeed(), Vole_Male::Dispersal(), and Init().

m_MinTerrRange

unsigned int Vole_Base::m_MinTerrRange

protected

The minimum territory range

Definition at line 164 of file vole_all.h.

Referenced by CalculateCarryingCapacity(), Init(), Vole_JuvenileMale::ReInit(), Vole_Male::ReInit(), Vole_JuvenileFemale::ReInit(), Vole_Female::ReInit(), Vole_Male::st_Infanticide(), Vole_Female::Vole_Female(), Vole_JuvenileFemale::Vole_JuvenileFemale(), Vole_JuvenileMale::Vole_JuvenileMale(), and Vole_Male::Vole_Male().

m_MotherId

unsigned Vole_Base::m_MotherId

protected

The id number of the mother

Definition at line 166 of file vole_all.h.

Referenced by Set_MotherId(), Vole_JuvenileMale::st_BecomeSubAdult(), Vole_JuvenileFemale::st_BecomeSubAdult(), and SupplyMotherId().

m_MyGenes

GeneticMaterial Vole_Base::m_MyGenes

protected

Their genes

Definition at line 213 of file vole_all.h.

Referenced by CopyMyself(), GetDirectFlag(), GetGeneticFlag(), Init(), SetDirectFlag(), SetGeneticFlag(), Vole_JuvenileMale::st_BecomeSubAdult(), Vole_JuvenileFemale::st_BecomeSubAdult(), Vole_Female::st_Lactating(), SupplyAllele(), SupplyGenes(), SupplyHeteroZyg(), SupplyHomoZyg(), SupplyMyAllele(), UnsetDirectFlag(), and UnsetGeneticFlag().

m_NoOfYoungTotal

int Vole_Base::m_NoOfYoungTotal

protected

Definition at line 200 of file vole_all.h.

Referenced by Init(), Set_NoYoungTot(), Vole_Female::st_GiveBirth(), and SupplyTotNoYoung().

m_OurPopulation

Vole_Population_Manager* Vole_Base::m_OurPopulation

Definition at line 408 of file vole_all.h.

Referenced by Vole_JuvenileMale::BeginStep(), Vole_JuvenileFemale::BeginStep(), CalculateCarryingCapacity(), CheckTraps(), CopyMyself(), Vole_JuvenileMale::Dispersal(), Vole_Male::Dispersal(), Vole_JuvenileFemale::Dispersal(), Vole_Male::EndStep(), Vole_JuvenileFemale::EndStep(), Vole_JuvenileMale::FreeLocation(), Vole_JuvenileFemale::FreeLocation(), Vole_JuvenileMale::GetLocation(), Vole_JuvenileFemale::GetLocation(), Init(), MoveQuality(), Vole_JuvenileMale::OnFarmEvent(), Vole_JuvenileFemale::OnFarmEvent(), Vole_Female::OnInfanticideAttempt(), Vole_JuvenileMale::OnKilled(), Vole_JuvenileFemale::OnKilled(), Vole_JuvenileMale::SetLocation(), Vole_JuvenileFemale::SetLocation(), Vole_JuvenileMale::st_BecomeSubAdult(), Vole_JuvenileFemale::st_BecomeSubAdult(), Vole_JuvenileMale::st_Eval_n_Explore(), Vole_Male::st_Eval_n_Explore(), Vole_Female::st_GiveBirth(), Vole_Male::st_Infanticide(), Vole_Female::st_Lactating(), Vole_Female::st_Mating(), Vole_Male::st_Maturation(), Vole_Female::st_Special_Explore(), Vole_JuvenileFemale::Step(), and Vole_Female::Step().

m_PolyRefBorn

int Vole_Base::m_PolyRefBorn

protected

Their polygon ref at birth location

Definition at line 184 of file vole_all.h.

Referenced by Set_PolyRefBorn(), and SupplyPolyRefBorn().

m_Reserves

int Vole_Base::m_Reserves

protected

Their reserves - in days that they can survive without food

Definition at line 206 of file vole_all.h.

Referenced by Init(), and Vole_Female::st_Lactating().

m_Sex

bool Vole_Base::m_Sex

protected

Their sex Male==true Female==false

Definition at line 174 of file vole_all.h.

Referenced by Vole_JuvenileMale::ReInit(), Vole_Male::ReInit(), Vole_JuvenileFemale::ReInit(), SupplySex(), Vole_JuvenileFemale::Vole_JuvenileFemale(), Vole_JuvenileMale::Vole_JuvenileMale(), and Vole_Male::Vole_Male().

m_TerrRange

int Vole_Base::m_TerrRange

protected

The size of their territory (radius of a square)

Definition at line 172 of file vole_all.h.

Referenced by CalculateCarryingCapacity(), CheckTraps(), Vole_Male::DetermineTerritorySize(), Vole_Male::Dispersal(), Vole_JuvenileFemale::EndStep(), Init(), Vole_JuvenileMale::ReInit(), Vole_Male::ReInit(), Vole_JuvenileFemale::ReInit(), Vole_Female::ReInit(), Vole_JuvenileMale::st_Eval_n_Explore(), Vole_Male::st_Eval_n_Explore(), Vole_Female::st_Special_Explore(), SupplyTerrRange(), Vole_Female::Vole_Female(), Vole_JuvenileFemale::Vole_JuvenileFemale(), Vole_JuvenileMale::Vole_JuvenileMale(), and Vole_Male::Vole_Male().

m_VegBorn

int Vole_Base::m_VegBorn

protected

The vegetation type at birth location

Definition at line 188 of file vole_all.h.

Referenced by Set_VegBorn(), and SupplyVegBorn().

m_Weight

double Vole_Base::m_Weight

protected

Their weight in grams

Definition at line 192 of file vole_all.h.

Referenced by Vole_Male::DetermineTerritorySize(), Vole_JuvenileMale::EndStep(), Vole_Male::EndStep(), Vole_JuvenileFemale::EndStep(), Init(), Vole_JuvenileMale::ReInit(), Vole_Male::ReInit(), Vole_JuvenileFemale::ReInit(), Vole_Female::ReInit(), SetWeight(), Vole_JuvenileMale::st_BecomeSubAdult(), Vole_JuvenileFemale::st_BecomeSubAdult(), Vole_Male::st_Infanticide(), SupplyWeight(), Vole_Female::Vole_Female(), Vole_JuvenileFemale::Vole_JuvenileFemale(), Vole_JuvenileMale::Vole_JuvenileMale(), and Vole_Male::Vole_Male().

m_XBorn

int Vole_Base::m_XBorn

protected

Their x location at birth

Definition at line 180 of file vole_all.h.

Referenced by Set_XBorn(), and SupplyXBorn().

m_YBorn

int Vole_Base::m_YBorn

protected

Their y location at birth

Definition at line 182 of file vole_all.h.

Referenced by Set_YBorn(), and SupplyYBorn().

SimH

int Vole_Base::SimH

protected

The size of simulation landscape

Definition at line 210 of file vole_all.h.

Referenced by CalculateCarryingCapacity(), DoWalkingCorrect(), Escape(), Init(), MoveTo(), and Vole_Male::st_Eval_n_Explore().

SimW

int Vole_Base::SimW

protected

Definition at line 210 of file vole_all.h.

Referenced by CalculateCarryingCapacity(), DoWalkingCorrect(), Escape(), Init(), MoveTo(), and Vole_Male::st_Eval_n_Explore().

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The documentation for this class was generated from the following files:

• C:/Repo/ALMaSS_All/Vole/vole_all.h
• C:/Repo/ALMaSS_All/Vole/Vole_all.cpp