ALMaSS Vole ODDox  1.1
The vole model description following ODdox protocol
AlleleFreq1616 Class Reference

#include <GeneticMaterial.h>

Public Member Functions

 AlleleFreq1616 ()
 
int SupplyAN (int loc, int al)
 

Protected Attributes

int AlleleNumber [16][16]
 
float AlleleFrequency [16][16]
 
float HE [16]
 
float HO [16]
 
int NoAlleles [16]
 

Detailed Description

Definition at line 125 of file GeneticMaterial.h.

Constructor & Destructor Documentation

◆ AlleleFreq1616()

AlleleFreq1616::AlleleFreq1616 ( )

Definition at line 558 of file GeneticMaterial.cpp.

558  {
559  FILE * FreqFile = fopen("GeneticFrequencies_1616_Mut.txt", "r" );
560  int data;
561  if ( !FreqFile ) {
562  g_msg->Warn( "GeneticFrequencies_1616_Mut.txt File missing - AllelFreq1616", "" );
563  exit( 0 );
564  }
565  for ( int i = 0; i < 16; i++ ) {
566  for ( int j = 0; j < 16; j++ ) {
567  fscanf( FreqFile, "%d", & data );
568  AlleleNumber[ i ] [ j ] = data;
569  }
570  }
571 
572  fclose( FreqFile );
573 }

References AlleleNumber.

Member Function Documentation

◆ SupplyAN()

int AlleleFreq1616::SupplyAN ( int  loc,
int  al 
)
inline

Definition at line 135 of file GeneticMaterial.h.

135 { return AlleleNumber[loc][al];}

References AlleleNumber.

Referenced by GeneticMaterial1616::Initiation().

Member Data Documentation

◆ AlleleFrequency

float AlleleFreq1616::AlleleFrequency[16][16]
protected

Definition at line 129 of file GeneticMaterial.h.

◆ AlleleNumber

int AlleleFreq1616::AlleleNumber[16][16]
protected

Definition at line 128 of file GeneticMaterial.h.

Referenced by AlleleFreq1616(), and SupplyAN().

◆ HE

float AlleleFreq1616::HE[16]
protected

Definition at line 130 of file GeneticMaterial.h.

◆ HO

float AlleleFreq1616::HO[16]
protected

Definition at line 131 of file GeneticMaterial.h.

◆ NoAlleles

int AlleleFreq1616::NoAlleles[16]
protected

Definition at line 132 of file GeneticMaterial.h.


The documentation for this class was generated from the following files:
AlleleFreq1616::AlleleNumber
int AlleleNumber[16][16]
Definition: GeneticMaterial.h:128