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BERTHA - Big Data Centre for Environment and Health

Health Outcomes


Background

In the modern World of today, the impetus of disease prevention and treatment focus on the main causes of mortality and morbidity, which is dominated by the non-communicable diseases (NCDs): cancers, cardiovascular, respiratory, and neurological diseases, mental health and increasingly, wellbeing and diabetes.

Inflammation and oxidative stress provoked by exposure to e.g. air-pollution are suggested to be a key element in the development of disease. Hence, identification of relevant biomarkers for inflammation, oxidative stress or immune dysregulation associated to pollutants like particulate matter (e.g. PM10 and PM2.5) or nitrogen oxides (NOx) is essential, when we investigate the mechanisms in disease development and for the surveillance of populations, and even more so for surveillance of susceptible groups with established NCDs.

Inflammation and oxidative stress provoked by exposure to e.g. air-pollution are suggested to be a key element in the development of disease. Hence, identification of relevant biomarkers for inflammation, oxidative stress or immune dysregulation associated to pollutants like particulate matter (e.g. PM10 and PM2.5) or nitrogen oxides (NOx) is essential, when we investigate the mechanisms in disease development and for the surveillance of populations, and even more so for surveillance of susceptible groups with established NCDs. 

Data

We have access to powerful tools and unique data sources to measure health effects of environmental exposures.

Our data include exposure data (noise, air and water quality), health register data, genetic data and biomarker assessments on samples from three cohorts: 110,000 healthy individuals from the Danish Blood Donor Study, minimum 2000 individuals exercising regularly from the Garmin-RUNSAFE cohort, and minimum 2000 Danish patients with implanted Cardioverter Defibrillators.  We will also analyse inter-generational health effects, and include register data from the Danish Twin Registry with up to 86,000 twin pairs in our analyses. 

The exposure data are modelled on individual level in the BERTHA work package on Environmental Exposures, monitored directly by Garmin smartwathces and the new personal sensors developed for and used in the BERTHA work package on Personalised Sensors. The health registry data, demographic and some genetic data are collected and linked by the BERTHA work package on Big data Collection and Linkage. 

Methods

The techniques involved in the research of this work package will be determined by the availability of high resolution data over several decades, covering almost the entire area of the country. In the temporal domain, this means the Cardioverter Defibrillator data, the data from the new personal monitors and the Garmin smartwatches, the repeated blood samples of the blood donors, and the daily admission to hospitals or emergency rooms for acute diseases or exacerbation of existing diseases. In the spatial domain the health data from registries will be combined with the high resolution data on air pollution, noise and drinking water quality. 

We will explore the association between environmental exposures, and biomarker and health outcomes and their interaction with the genomic variation, we find in the cohorts. 

We will use omics techniques to explore pathways linked to a higher disease risk. After refinement and identification of biomarkers associated to environmental exposure, we will test the most promising biomarkers as predictors of disease risk on the individual level. 

Current projects

  • Changing Urban Form and Health Consequences (Tzu-Hsin Karen Chen, PhD student supervised by Clive Sabel)
  • Air Pollution and the Effects on Development of Asthma and Allergy using High-Resolution Spatial-Temporal Data (Kathrine Agergård Kaspersen, PhD student supervised by Christian Erikstrup)
  • Identifying Novel Biomarkers for Exposure to Air Pollution Among Danish Blood Donors (Bertram Kjerulff, PhD student supervised by Christian Erikstrup) 

 

Potential topics for new PhD or Post Doc projects

  • Using big data to explore spatial-temporal relations in the ’Bermuda Triangle’ between Personal risk profiles, Environmental exposures and Biomarkers of health
  • Exposure to contaminants from drinking water and association with of inflammation markers, oxidative stress and new biomarkers among healthy individuals
  • Air pollution and effects on the development of childhood asthma and allergy using high resolution spatial-temporal data, SES data and parental information

 Work Package Leader:  Professor Torben Sigsgaard